Scientific Collaboration

Articles

• GOLEM: A tool for visualizing the distribution of Gene regulatOry eLEMents within the plant promoters with a focus on male gametophyte

  NEVOSÁD Lukáš KLODOVÁ Božena RUDOLF Jiří RAČEK Tomáš PŘEROVSKÁ Tereza KUSOVÁ Alžbeta SVOBODOVÁ Radka HONYS David PROCHÁZKOVÁ SCHRUMPFOVÁ Petra

  Article in Periodical

  Plant Journal, year: 2025, volume: 121, edition: 5, DOI

• Gromacs MetaDump: a tool for extracting GROMACS simulation metadata

  ROŠINEC Adrián SLANINÁKOVÁ Terézia PAVLÍK Tomáš RANDIAK Róbert SVOBODA Tomáš RAČEK Tomáš BUČEKOVÁ Gabriela SCHINDLER Ondřej ANTOL Matej KŘENEK Aleš BERKA Karel SVOBODOVÁ Radka

  Article in Periodical

  Journal of Cheminformatics, year: 2025, volume: 17, edition: 1, DOI

• Inhaled Lead Nanoparticles Enter the Brain through the Olfactory Pathway and Induce Neurodegenerative Changes Resembling Tauopathies

  JEDLIČKOVÁ Adriena KRISTEKOVÁ Daniela HUSÁKOVÁ Zuzana COUFALÍK Pavel VRLÍKOVÁ Lucie SMUTNÁ Tereza CAPANDOVÁ Michaela ALEXA Lukáš LUSKOVÁ Denisa KŘŮMAL Kamil JAKEŠOVÁ Veronika VEČEŘA Zbyněk ZEZULA Nikodém KANICKÝ Viktor HAMPL Aleš VACULOVIČ Tomáš MIKUŠKA Pavel DUMKOVÁ Jana BUCHTOVÁ Marcela

  Article in Periodical

  ACS Nano, year: 2025, volume: 19, edition: 13, DOI

• Introducing a new adaptive look-up table subset selection method for leaf chlorophyll and carotenoids retrieval in broadleaved forests

  SLANINÁKOVÁ Terézia ŠVIK Marian REBOK Tomáš HANOUSEK Tomáš JANOUTOVÁ Růžena

  Article in Periodical

  Remote Sensing Letters, year: 2025, volume: 16, edition: 6, DOI

• MOLEonline: a web-based tool for analysing channels, tunnels and pores (2025 update)

  RAČEK Tomáš VEĽKÝ Dušan BUČEKOVÁ Gabriela SCHINDLER Ondřej HUTAŘOVÁ VAŘEKOVÁ Ivana ŠPAČKOVÁ Anna BAZGIER Václav BERKA Karel SVOBODOVÁ Radka

  Article in Periodical

  Bioinformatics, year: 2025, volume: 41, edition: 9, DOI

• Multiple Origins of Sex Chromosomes in Nothobranchius Killifishes

  HOSPODARSKA Monika MORA Pablo VOLENIKOVA Anna Chung AL-RIKABI Ahmed ALTMANOVA Marie SIMANOVSKY Sergey A. TOLAR Nikolas PAVLICA Tomas JANECKOVA Karolina STUNDLOVA Jana BOBRYSHAVA Kseniya JANKASEK Marek HIRMAN Matyas LIEHR Thomas REICHARD Martin KRYSANOV Eugene Yu. RAB Petr ENGLERT Christoph NGUYEN Petr SEMBER Alexandr

  Article in Periodical

  MOLECULAR ECOLOGY, year: 2025, volume: 34, edition: 16, DOI

• PDBCharges: Quantum-Mechanical Partial Atomic Charges for PDB Structures

  SCHINDLER Ondřej SVOBODA Tomáš ROŠINEC Adrián RAČEK Tomáš BUČEKOVÁ Gabriela TICHÝ Dominik BERKA Karel SVOBODOVÁ Radka

  Article in Periodical

  Nucleic Acids Research, year: 2025, volume: 53, edition: W1, DOI

• PDBCharges: Quantum-Mechanical Partial Atomic Charges for PDB Structures

  SCHINDLER Ondřej SVOBODA Tomas ROSINEC Adrian RAČEK Tomáš BUCEKOVA Gabriela TICHY Dominik BERKA Karel SVOBODOVÁ Radka

  Article in Periodical

  NUCLEIC ACIDS RESEARCH, year: 2025, volume: 53, edition: W1, DOI

• SpecTUS: Spectral Translator for Unknown Structures annotation from EI-MS spectra

  HÁJEK Adam HECHT Helge PRICE Elliott James KŘENEK Aleš

  Article in Periodical

• Tumor Suppressor miR-34a: Potential Biomarker of TACE Response in HCC

  ZAVADIL Jan JURÁČEK Jaroslav ČECHOVÁ Barbora ROHAN Tomáš HUSTÝ Jakub SLABÝ Ondřej LITSCHMANNOVÁ Martina UHER Michal GOLDBERG S. Nahum ANDRAŠINA Tomáš

  Article in Periodical

  CARDIOVASCULAR AND INTERVENTIONAL RADIOLOGY, year: 2025, volume: 48, edition: 1, DOI